GenusDistance¶

class turbustat.statistics.GenusDistance(img1, img2, smoothing_radii=None, fiducial_model=None)[source] [edit on github]¶

Bases: object

Distance Metric for the Genus Statistic.

Parameters:	img1 - numpy.ndarray 2D image. img2 - numpy.ndarray 2D image. smoothing_radii : list, optional Kernel radii to smooth data to. fiducial_model : Genus Computed Genus object. Use to avoid recomputing.

Methods Summary

Methods Documentation

distance_metric(verbose=False)[source] [edit on github]¶

Data is centered and normalized (via normalize). The distance is the difference between cubic splines of the curves.

Parameters:	verbose : bool, optional Enables plotting.